scripts/tricium_clang_tidy.py

# Copyright 2020 The ChromiumOS Authors
# Use of this source code is governed by a BSD-style license that can be
# found in the LICENSE file.

"""Runs clang-tidy across the given files, dumping diagnostics to a JSON file.

This script is intended specifically for use with Tricium (go/tricium).
"""

# From an implementation perspective, it's good to note that this script
# cooperates with the toolchain's compiler wrapper. In particular,
# ${cros}/src/third_party/toolchain-utils/compiler_wrapper/clang_tidy_flag.go.
#
# When |WITH_TIDY=tricium| is set and the wrapper (which is already $CC/$CXX)
# is invoked, $CC will invoke clang-tidy _as well_ as the regular compiler.
# This clang-tidy invocation will result in a few files being dumped to
# |LINT_BASE| (below):
#   - "${LINT_BASE}/some-prefix.yaml" -- a YAML file that represents
#     clang-tidy's diagnostics for the file the compiler was asked to build
#   - "${LINT_BASE}/some-prefix.json" -- metadata about how the above YAML file
#     was generated, including clang-tidy's exit code, stdout, etc. See
#     |InvocationMetadata| below.
#
# As one might expect, the compiler wrapper writes the JSON file only after
# clang-tidy is done executing.
#
# This directory might contain other files, as well; these are ignored by this
# script.

import bisect
import json
import logging
import multiprocessing
import os
from pathlib import Path
import re
import subprocess
import sys
import tempfile
import traceback
from typing import (
    Any,
    Dict,
    Iterable,
    List,
    NamedTuple,
    Optional,
    Set,
    Tuple,
    Union,
)

import yaml  # pylint: disable=import-error

from chromite.lib import build_target_lib
from chromite.lib import commandline
from chromite.lib import constants
from chromite.lib import cros_build_lib
from chromite.lib import osutils
from chromite.lib import portage_util
from chromite.lib import workon_helper


# The directory under which the compiler wrapper stores clang-tidy reports.
LINT_BASE = Path("/tmp/linting_output/clang-tidy")

PLATFORM_PATH = constants.CHROOT_SOURCE_ROOT / "src/platform"
PLATFORM2_PATH = constants.CHROOT_SOURCE_ROOT / "src/platform2"


class TidyReplacement(NamedTuple):
    """Represents a replacement emitted by clang-tidy.

    File path is omitted, since these are intended to be associated with
    TidyDiagnostics with identical paths.
    """

    new_text: str
    start_line: int
    end_line: int
    start_char: int
    end_char: int
    start_offset: int
    end_offset: int


class TidyExpandedFrom(NamedTuple):
    """Represents a macro expansion.

    When a diagnostic is inside of a macro expansion, clang-tidy emits
    information about where said macro was expanded from. |TidyDiagnostic|s will
    have one |TidyExpandedFrom| for each level of this expansion.
    """

    file_path: Path
    line_number: int

    def to_dict(self) -> Dict[str, Any]:
        """Converts this |TidyExpandedFrom| to a dict serializeable as JSON."""
        return {
            "file_path": self.file_path.as_posix(),
            "line_number": self.line_number,
        }


class Error(Exception):
    """Base error class for tricium-clang-tidy."""


class ClangTidyParseError(Error):
    """Raised when clang-tidy parsing jobs fail."""

    def __init__(self, failed_jobs: int, total_jobs: int):
        super().__init__(f"{failed_jobs}/{total_jobs} parse jobs failed")
        self.failed_jobs = failed_jobs
        self.total_jobs = total_jobs


class TidyDiagnostic(NamedTuple):
    """A diagnostic emitted by clang-tidy.

    Note that we shove these in a set for cheap deduplication, and we sort based
    on the natural element order here. Sorting is mostly just for
    deterministic/pretty output.
    """

    file_path: Path
    line_number: int
    diag_name: str
    message: str
    replacements: Tuple[TidyReplacement]
    expansion_locs: Tuple[TidyExpandedFrom]

    def normalize_paths_to(self, where: str) -> "TidyDiagnostic":
        """Creates a new TidyDiagnostic with all paths relative to |where|."""
        return self._replace(
            # Use relpath because Path.relative_to requires that `self` is
            # rooted at `where`.
            file_path=Path(os.path.relpath(self.file_path, where)),
            expansion_locs=tuple(
                x._replace(file_path=Path(os.path.relpath(x.file_path, where)))
                for x in self.expansion_locs
            ),
        )

    def to_dict(self) -> Dict[str, Any]:
        """Converts this |TidyDiagnostic| to a dict serializeable as JSON."""
        return {
            "file_path": self.file_path.as_posix(),
            "line_number": self.line_number,
            "diag_name": self.diag_name,
            "message": self.message,
            "replacements": [x._asdict() for x in self.replacements],
            "expansion_locs": [x.to_dict() for x in self.expansion_locs],
        }


class ClangTidySchemaError(Error):
    """Raised when we encounter malformed YAML."""

    def __init__(self, err_msg: str):
        super().__init__(err_msg)
        self.err_msg = err_msg


class LineOffsetMap:
    """Convenient API to turn offsets in a file into line numbers."""

    def __init__(self, newline_locations: Iterable[int]):
        line_starts = [x + 1 for x in newline_locations]
        # The |bisect| logic in |get_line_number|/|get_line_offset| gets a bit
        # complicated around the first and last lines of a file. Adding
        # boundaries here removes some complexity from those implementations.
        line_starts.append(0)
        line_starts.append(sys.maxsize)
        line_starts.sort()

        assert line_starts[0] == 0, line_starts[0]
        assert line_starts[1] != 0, line_starts[1]
        assert line_starts[-2] < sys.maxsize, line_starts[-2]
        assert line_starts[-1] == sys.maxsize, line_starts[-1]

        self._line_starts = line_starts

    def get_line_number(self, char_number: int) -> int:
        """Given a char offset into a file, returns its line number."""
        assert 0 <= char_number < sys.maxsize, char_number
        return bisect.bisect_right(self._line_starts, char_number)

    def get_line_offset(self, char_number: int) -> int:
        """Given a char offset into a file, returns its column number."""
        assert 0 <= char_number < sys.maxsize, char_number
        line_start_index = (
            bisect.bisect_right(self._line_starts, char_number) - 1
        )
        return char_number - self._line_starts[line_start_index]

    @staticmethod
    def for_text(data: str) -> "LineOffsetMap":
        """Creates a LineOffsetMap for the given string."""
        return LineOffsetMap(m.start() for m in re.finditer(r"\n", data))


def transform_filepaths(
    file_path: str, tidy_invocation_dir: Path
) -> Optional[Path]:
    """Try to transform a weird path into the true path via educated guessing.

    Args:
        file_path: The file path as reported by clang tidy.
        tidy_invocation_dir: The working directory when tidy was invoked.

    Returns:
        Path which corresponds to input and exists or None.
    """

    if not file_path:
        return None
    path = Path(file_path)

    def replace_path(pattern: str, replacement: str) -> Optional[Path]:
        if pattern in file_path:
            new_path = Path(re.sub(f"(^|.*/){pattern}", replacement, file_path))
            if new_path.exists():
                return new_path
        return None

    possible_replacements = (
        # .../platform2 almost always refers to platform2 regardless of prefix.
        ("platform2", PLATFORM2_PATH),
        # .../usr/include/ sometimes refers to things in platform or platform2.
        ("usr/include", PLATFORM2_PATH),
        ("usr/include", PLATFORM_PATH),
        # .../gen/include/ sometimes refers to things in platform or platform2.
        ("gen/include", PLATFORM2_PATH),
        ("gen/include", PLATFORM_PATH),
    )

    for pattern, replacement in possible_replacements:
        path_guess = replace_path(pattern, str(replacement))
        if path_guess:
            return path_guess.resolve()

    # Rarely (e.g., in the case of missing |#include|s, clang will emit relative
    # file paths for diagnostics.
    if path.is_absolute():
        if path.exists():
            return path.resolve()
    else:
        from_invocation_dir = tidy_invocation_dir / path
        if from_invocation_dir.exists():
            return from_invocation_dir.resolve()

    logging.warning(
        "Tidy referenced a file that cannot be located: %r",
        file_path,
    )
    return path


def parse_tidy_fixes_file(
    tidy_invocation_dir: Path, yaml_data: Any
) -> Iterable[TidyDiagnostic]:
    """Parses a clang-tidy YAML file.

    Args:
        yaml_data: The parsed YAML data from clang-tidy's fixits file.
        tidy_invocation_dir: The directory clang-tidy was run in.

    Returns:
        A generator of |TidyDiagnostic|s.
    """
    assert tidy_invocation_dir.is_absolute(), tidy_invocation_dir

    if yaml_data is None:
        return

    # A cache of file_path => LineOffsetMap so we only need to load offsets once
    # per file per |parse_tidy_fixes_file| invocation.
    cached_line_offsets = {}

    def get_line_offsets(file_path: Optional[Path]) -> LineOffsetMap:
        """Gets a LineOffsetMap for the given |file_path|."""
        assert not file_path or file_path.is_absolute(), file_path

        if file_path in cached_line_offsets:
            return cached_line_offsets[file_path]

        # Sometimes tidy will give us empty file names; they don't map to any
        # file, and are generally issues it has with CFLAGS, etc. File offsets
        # don't matter in those, so use an empty map.
        offsets = LineOffsetMap(())
        if file_path:
            try:
                offsets = LineOffsetMap.for_text(
                    file_path.read_text(encoding="utf-8")
                )
            except FileNotFoundError:
                logging.warning(
                    "Cannot get offsets for %r since file does not exist.",
                    file_path,
                )
        cached_line_offsets[file_path] = offsets
        return offsets

    try:
        for diag in yaml_data["Diagnostics"]:
            message = diag["DiagnosticMessage"]
            file_path = message["FilePath"]

            absolute_file_path = transform_filepaths(
                file_path, tidy_invocation_dir
            )
            line_offsets = get_line_offsets(absolute_file_path)

            replacements = []
            for replacement in message.get("Replacements", ()):
                replacement_file_path = transform_filepaths(
                    replacement["FilePath"], tidy_invocation_dir
                )

                # FIXME(gbiv): This happens in practice with things like
                # hicpp-member-init. Supporting it should be simple, but I'd
                # like to get the basics running first.
                if replacement_file_path != absolute_file_path:
                    logging.warning(
                        "Replacement %r wasn't in original file %r (diag: %r)",
                        replacement_file_path,
                        file_path,
                        diag,
                    )
                    continue

                start_offset = replacement["Offset"]
                end_offset = start_offset + replacement["Length"]
                replacements.append(
                    TidyReplacement(
                        new_text=replacement["ReplacementText"],
                        start_line=line_offsets.get_line_number(start_offset),
                        end_line=line_offsets.get_line_number(end_offset),
                        start_char=line_offsets.get_line_offset(start_offset),
                        end_char=line_offsets.get_line_offset(end_offset),
                        start_offset=start_offset,
                        end_offset=end_offset,
                    )
                )

            expansion_locs = []
            for note in diag.get("Notes", ()):
                if not note["Message"].startswith("expanded from macro "):
                    continue

                absolute_note_path = transform_filepaths(
                    note["FilePath"], tidy_invocation_dir
                )
                note_offsets = get_line_offsets(absolute_note_path)
                expansion_locs.append(
                    TidyExpandedFrom(
                        file_path=absolute_note_path,
                        line_number=note_offsets.get_line_number(
                            note["FileOffset"]
                        ),
                    )
                )

            yield TidyDiagnostic(
                diag_name=diag["DiagnosticName"],
                message=message["Message"],
                file_path=absolute_file_path,
                line_number=line_offsets.get_line_number(message["FileOffset"]),
                replacements=tuple(replacements),
                expansion_locs=tuple(expansion_locs),
            )
    except KeyError as k:
        key_name = k.args[0]
        raise ClangTidySchemaError(f"Broken yaml: missing key {key_name!r}")


# Represents metadata about a clang-tidy invocation.
class InvocationMetadata(NamedTuple):
    """Metadata describing a singular invocation of clang-tidy."""

    exit_code: int
    invocation: List[str]
    lint_target: str
    stdstreams: str
    wd: str


class ExceptionData:
    """Info about an exception that can be sent across processes."""

    def __init__(self):
        """Builds instance; only intended to be called from `except` blocks."""
        self._str = traceback.format_exc()

    def __str__(self):
        return self._str


def parse_tidy_invocation(
    json_file: Path,
) -> Union[ExceptionData, Tuple[InvocationMetadata, List[TidyDiagnostic]]]:
    """Parses a clang-tidy invocation result based on a JSON file.

    This is intended to be run in a separate process, which Exceptions and
    locking and such work notoriously poorly over, so it's never intended to
    |raise| (except under a KeyboardInterrupt or similar).

    Args:
        json_file: The JSON invocation metadata file to parse.

    Returns:
        An |ExceptionData| instance on failure. On success, it returns a
        (InvocationMetadata, [TidyLint]).
    """
    try:
        assert json_file.suffix == ".json", json_file

        with json_file.open(encoding="utf-8") as f:
            raw_meta = json.load(f)

        meta = InvocationMetadata(
            exit_code=raw_meta["exit_code"],
            invocation=[raw_meta["executable"]] + raw_meta["args"],
            lint_target=raw_meta["lint_target"],
            stdstreams=raw_meta["stdstreams"],
            wd=raw_meta["wd"],
        )

        raw_crash_output = raw_meta.get("crash_output")
        if raw_crash_output:
            crash_reproducer_path = raw_crash_output["crash_reproducer_path"]
            output = raw_crash_output["stdstreams"]
            raise RuntimeError(
                f"""\
Clang-tidy apparently crashed; dumping lots of invocation info:
## Tidy JSON file target: {json_file}
## Invocation: {meta.invocation}
## Target: {meta.lint_target}
## Crash reproducer is at: {crash_reproducer_path}
## Output producing reproducer:
{output}
## Output from the crashing invocation:
{meta.stdstreams}
"""
            )

        yaml_file = json_file.with_suffix(".yaml")
        # If there is no yaml file, clang-tidy was either killed or found no
        # lints.
        if not yaml_file.exists():
            if meta.exit_code:
                raise RuntimeError(
                    "clang-tidy didn't produce an output file for "
                    f"{json_file}. Output:\n{meta.stdstreams}"
                )
            else:
                return meta, []

        with yaml_file.open("rb") as f:
            yaml_data = yaml.safe_load(f)
        return meta, list(parse_tidy_fixes_file(Path(meta.wd), yaml_data))
    except Exception:
        return ExceptionData()


def generate_lints(board: str, ebuild_path: str) -> Path:
    """Collects the lints for a given package on a given board.

    Args:
        board: the board to collect lints for.
        ebuild_path: the path to the ebuild to collect lints for.

    Returns:
        The path to a tmpdir that all of the lint YAML files (if any) will be
        in. This will also be populated by JSON files containing
        InvocationMetadata. The generation of this is handled by our compiler
        wrapper.
    """
    logging.info("Running lints for %r on board %r", ebuild_path, board)

    osutils.RmDir(LINT_BASE, ignore_missing=True, sudo=True)
    osutils.SafeMakedirs(LINT_BASE, 0o777, sudo=True)

    # FIXME(gbiv): |test| might be better here?
    result = cros_build_lib.run(
        [f"ebuild-{board}", ebuild_path, "clean", "compile"],
        check=False,
        print_cmd=True,
        extra_env={"WITH_TIDY": "tricium"},
        capture_output=True,
        encoding="utf-8",
        errors="replace",
    )

    if result.returncode:
        status = (
            f"failed with code {result.returncode}; output:\n{result.stdout}"
        )
        log_fn = logging.warning
    else:
        status = "succeeded"
        log_fn = logging.info

    log_fn("Running |ebuild| on %s %s", ebuild_path, status)
    lint_tmpdir = tempfile.mkdtemp(prefix="tricium_tidy")
    osutils.CopyDirContents(LINT_BASE, lint_tmpdir)
    return Path(lint_tmpdir)


def collect_lints(
    lint_tmpdir: Path, yaml_pool: multiprocessing.Pool
) -> Set[TidyDiagnostic]:
    """Collects lints for a given directory filled with linting artifacts."""
    json_files = list(lint_tmpdir.glob("*.json"))
    pending_parses = yaml_pool.imap(parse_tidy_invocation, json_files)

    parses_failed = 0
    all_complaints = set()
    for path, parse in zip(json_files, pending_parses):
        if isinstance(parse, ExceptionData):
            parses_failed += 1
            logging.error(
                "Parsing %r failed with an exception\n%s", path, parse
            )
            continue

        meta, complaints = parse
        if meta.exit_code:
            logging.warning(
                "Invoking clang-tidy on %r with flags %r exited with code %d; "
                "output:\n%s",
                meta.lint_target,
                meta.invocation,
                meta.exit_code,
                meta.stdstreams,
            )

        all_complaints.update(complaints)

    if parses_failed:
        raise ClangTidyParseError(parses_failed, len(json_files))

    return all_complaints


def setup_tidy(board: str, ebuild_list: List[portage_util.EBuild]):
    """Sets up to run clang-tidy on the given ebuilds for the given board."""
    packages = [x.package for x in ebuild_list]
    logging.info("Setting up to lint %r", packages)

    workon = workon_helper.WorkonHelper(
        build_target_lib.get_default_sysroot_path(board)
    )
    workon.StopWorkingOnPackages(packages=[], use_all=True)
    workon.StartWorkingOnPackages(packages)

    # We're going to be hacking with |ebuild| later on, so having all
    # dependencies in place is necessary so one |ebuild| won't stomp on another.
    cmd = [
        f"emerge-{board}",
        "--onlydeps",
        # Since each `emerge` may eat up to `ncpu` cores, limit the maximum
        # concurrency we can get here to (arbitrarily) 8 jobs. Having
        # `configure`s and such run in parallel is nice.
        f"-j{min(8, multiprocessing.cpu_count())}",
    ]
    cmd += packages
    result = cros_build_lib.run(cmd, print_cmd=True, check=False)
    if result.returncode:
        logging.error(
            "Setup failed with exit code %d; some lints may fail.",
            result.returncode,
        )


def run_tidy(
    board: str,
    ebuild_list: List[portage_util.EBuild],
    keep_dirs: bool,
    parse_errors_are_nonfatal: bool,
) -> Set[TidyDiagnostic]:
    """Runs clang-tidy on the given ebuilds for the given board.

    Returns the set of |TidyDiagnostic|s produced by doing so.
    """
    # Since we rely on build actions _actually_ running, we can't live with a
    # cache.
    osutils.RmDir(
        Path(build_target_lib.get_default_sysroot_path(board))
        / "var"
        / "cache"
        / "portage",
        ignore_missing=True,
        sudo=True,
    )

    results = set()
    # If clang-tidy dumps a lot of diags, it can take 1-10secs of CPU while
    # holding the GIL to |yaml.safe_load| on my otherwise-idle dev box.
    # |yaml_pool| lets us do this in parallel.
    with multiprocessing.pool.Pool() as yaml_pool:
        for ebuild in ebuild_list:
            lint_tmpdir = generate_lints(board, ebuild.ebuild_path)
            try:
                results |= collect_lints(lint_tmpdir, yaml_pool)
            except ClangTidyParseError:
                if not parse_errors_are_nonfatal:
                    raise
                logging.exception("Working on %r", ebuild)
            finally:
                if keep_dirs:
                    logging.info(
                        "Lints for %r are in %r",
                        ebuild.ebuild_path,
                        lint_tmpdir,
                    )
                else:
                    osutils.RmDir(lint_tmpdir, ignore_missing=True, sudo=True)
    return results


def resolve_package_ebuilds(
    board: str, package_names: Iterable[str]
) -> List[str]:
    """Figures out ebuild paths for the given package names."""

    def resolve_package(package_name_or_ebuild):
        """Resolves a single package name an ebuild path."""
        if package_name_or_ebuild.endswith(".ebuild"):
            return package_name_or_ebuild
        return cros_build_lib.run(
            [f"equery-{board}", "w", package_name_or_ebuild],
            check=True,
            stdout=subprocess.PIPE,
            encoding="utf-8",
        ).stdout.strip()

    # Resolving ebuilds takes time. If we get more than one (like when I'm
    # tesing on 50 of them), parallelism speeds things up quite a bit.
    with multiprocessing.pool.ThreadPool() as pool:
        return pool.map(resolve_package, package_names)


def filter_tidy_lints(
    only_files: Optional[Set[Path]],
    git_repo_base: Optional[Path],
    diags: Iterable[TidyDiagnostic],
) -> List[TidyDiagnostic]:
    """Transforms and filters the given TidyDiagnostics.

    Args:
        only_files: a set of file paths, or None; if this is not None, only
            |TidyDiagnostic|s in these files will be kept.
        git_repo_base: if not None, only files in the given directory will be
            kept. All paths of the returned diagnostics will be made relative to
            |git_repo_base|.
        diags: diagnostics to transform/filter.

    Returns:
        A sorted list of |TidyDiagnostic|s.
    """
    result_diags = []
    total_diags = 0

    for diag in diags:
        total_diags += 1

        if not diag.file_path:
            # Things like |-DFOO=1 -DFOO=2| can trigger diagnostics ("oh no
            # you're redefining |FOO| with a different value") in 'virtual'
            # files; these receive no name in clang.
            logging.info(
                "Dropping diagnostic %r, since it has no associated file", diag
            )
            continue

        file_path = Path(diag.file_path)
        if only_files and file_path not in only_files:
            continue

        if git_repo_base:
            if git_repo_base not in file_path.parents:
                continue
            diag = diag.normalize_paths_to(git_repo_base)

        result_diags.append(diag)

    logging.info(
        "Dropped %d/%d diags", total_diags - len(result_diags), total_diags
    )

    result_diags.sort()
    return result_diags


def get_parser() -> commandline.ArgumentParser:
    """Creates an argument parser for this script."""
    parser = commandline.ArgumentParser(description=__doc__)
    parser.add_argument(
        "--output", required=True, type="path", help="File to write results to."
    )
    parser.add_argument(
        "--git-repo-base",
        type="path",
        help=(
            "Base directory of the git repo we're looking at. If specified, "
            "only diagnostics in files in this directory will be emitted. All "
            "diagnostic file paths will be made relative to this directory."
        ),
    )
    parser.add_argument("--board", required=True, help="Board to run under.")
    parser.add_argument(
        "--package",
        action="append",
        required=True,
        help="Package(s) to build and lint. Required.",
    )
    parser.add_argument(
        "--keep-lint-dirs",
        action="store_true",
        help=(
            "Keep directories with tidy lints around; meant primarily for "
            "debugging."
        ),
    )
    parser.add_argument(
        "--nonfatal-parse-errors",
        action="store_true",
        help="Keep going even if clang-tidy's output is impossible to parse.",
    )
    parser.add_argument(
        "file",
        nargs="*",
        type="path",
        help=(
            "File(s) to output lints for. If none are specified, this tool "
            "outputs all lints that clang-tidy emits after applying filtering "
            "from |--git-repo-base|, if applicable."
        ),
    )
    return parser


def main(argv: List[str]) -> None:
    cros_build_lib.AssertInsideChroot()
    parser = get_parser()
    opts = parser.parse_args(argv)
    opts.Freeze()

    only_files = {Path(f).resolve() for f in opts.file}

    git_repo_base = opts.git_repo_base
    if git_repo_base:
        git_repo_base = Path(opts.git_repo_base)
        if not (git_repo_base / ".git").exists():
            # This script doesn't strictly care if there's a .git dir there;
            # more of a smoke check.
            parser.error(
                f"Given git repo base ({git_repo_base}) has no .git dir"
            )

    package_ebuilds = [
        portage_util.EBuild(x)
        for x in resolve_package_ebuilds(opts.board, opts.package)
    ]

    setup_tidy(opts.board, package_ebuilds)
    lints = filter_tidy_lints(
        only_files,
        git_repo_base,
        diags=run_tidy(
            opts.board,
            package_ebuilds,
            opts.keep_lint_dirs,
            opts.nonfatal_parse_errors,
        ),
    )

    osutils.WriteFile(
        opts.output,
        json.dumps({"tidy_diagnostics": [x.to_dict() for x in lints]}),
        atomic=True,
    )