When listing things for pruning, include anything that has an override dependency of None.

BUG=none
TEST=none
Review URL: http://codereview.chromium.org/6621043

git-svn-id: svn://svn.chromium.org/chrome/trunk/tools/depot_tools@77284 0039d316-1c4b-4281-b951-d872f2087c98
diff --git a/gclient.py b/gclient.py
index 98a8192..4b9d94c 100644
--- a/gclient.py
+++ b/gclient.py
@@ -734,7 +734,7 @@
       # Notify the user if there is an orphaned entry in their working copy.
       # Only delete the directory if there are no changes in it, and
       # delete_unversioned_trees is set to true.
-      entries = [i.name for i in self.tree(False)]
+      entries = [i.name for i in self.tree(False) if i.url]
       for entry, prev_url in self._ReadEntries().iteritems():
         if not prev_url:
           # entry must have been overridden via .gclient custom_deps